Aside from certain complications involving cross-references between separate documents, there is no good reason why there should be any issues with combined documents that contain cross-references.
The only cause that I can see for problems - and it's an easily-avoided one - is if the different documents cross-reference the same bookmark names. In that case, only one of each bookmark will survive the merge and all the cross-references to the bookmark would then point to the survivor.
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Cheers,
Paul Edstein
[Fmr MS MVP - Word]
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