Did you back up these notebooks?
OneNote stores workbooks in a folder, usually located on your 'My Documents' - called 'OneNote Notebooks'. Simply copy the contents of this directory to your new OneNote Notebooks directory on the new installation of windows.
Then just open a workbook, they'll open in OneNote as it did before.
If you did not back up your workbooks before formatting your hard drive and have no backup alternative (network etc) - i'm afraid your onenote workbooks may be lost (although i'm not certain of this - but I don't see any other way it restores workbook content from)
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