Following down the recreating path, perhaps this workflow will get you started. This uses an array to store the footnote entries as strings in an array and tag the locations. It then puts unformatted content into a new document and rebuilds the footnotes based on the tags inserted.
Code:
Private Sub NewDocPlusFootnotes()
Dim arrFN() As String, aFN As Footnote, iFN As Integer
Dim xDoc As Document, xNewDoc As Document, aRng As Range
Set xDoc = ActiveDocument
With xDoc
'Get the footnotes into a string array
If xDoc.Footnotes.Count > 0 Then
'.Footnotes.StartingNumber = 0
ReDim arrFN(1 To xDoc.Footnotes.Count)
For Each aFN In .Footnotes
aFN.Reference.InsertBefore "<fNote "
aFN.Reference.InsertAfter "/>"
arrFN(aFN.Index) = aFN.Range
Next aFN
End If
End With
'Create new document and fill with plain text
Set xNewDoc = Documents.Add
xNewDoc.Range.Text = xDoc.Range.Text 'unformatted text into new doc
'rebuild the footnotes
Set aRng = xNewDoc.Range
With aRng.Find
.ClearFormatting
For iFN = LBound(arrFN) To UBound(arrFN)
.Text = "<fNote " & Chr(2) & "/>"
If .Execute = True Then
aRng.Text = ""
xNewDoc.Footnotes.Add Range:=aRng, Text:=arrFN(iFN)
End If
aRng.Collapse Direction:=wdCollapseEnd
Next iFN
End With
End Sub