Hi Judith
I know you are pretty competent but not sure if you are able to edit XML?
When you add a logo to a master it is automatically marked as userDrawn="1" in the XML. This is not clever and ensures it remains when you apply a new template hence the two logos on top of each other.
If you know how to edit the XML remove all instances of userDrawn="1" or change to userDrawn="0" then resave the templates.
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